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Top 20 Most Read Articles
March 2007
The 20 articles with the most full-text downloads during the month, in descending order.
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WSXM: A software for scanning probe microscopy and a tool for nanotechnology Rev. Sci. Instrum. 78, 013705 (2007); http://dx.doi.org/10.1063/1.2432410 (8 pages) Online Publication Date: 31 January 2007
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In this work we briefly describe the most relevant features of WSXM, a freeware scanning probe microscopy software based on MS-Windows. The article is structured in three different sections: The introduction is a perspective on the importance of software on scanning probe microscopy. The second section is devoted to describe the general structure of the application; in this section the capabilities of WSXM to read third party files are stressed. Finally, a detailed discussion of some relevant procedures of the software is carried out.
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Remote transfer of ultrastable frequency references via fiber networks Rev. Sci. Instrum. 78, 021101 (2007); http://dx.doi.org/10.1063/1.2437069 (25 pages) Online Publication Date: 28 February 2007
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Three distinct techniques exist for distributing an ultrastable frequency reference over optical fibers. For the distribution of a microwave frequency reference, an amplitude-modulated continuous wave (cw) laser can be used. Over kilometer-scale lengths this approach provides an instability at 1 s of ∼ 3×10−14 without stabilization of the fiber-induced noise and ∼ 1×10−14 with active noise cancellation. An optical frequency reference can be transferred by directly transmitting a stabilized cw laser over fiber and then disseminated to other optical and microwave regions using an optical frequency comb. This provides an instability at 1 s of 2×10−14 without active noise cancellation and 3×10−15 with active noise cancellation [Recent results reduce the instability at 1 s to 6×10−18.] Finally, microwave and optical frequency references can be simultaneously transmitted using an optical frequency comb, and we expect the optical transfer to be similar in performance to the cw optical frequency transfer. The instability at 1 s for transfer of a microwave frequency reference with the comb is ∼ 3×10−14 without active noise cancellation and <7×10−15 with active stabilization. The comb can also distribute a microwave frequency reference with root-mean-square timing jitter below 16 fs integrated over the Nyquist bandwidth of the pulse train ( ∼ 50 MHz) when high-bandwidth active noise cancellation is employed, which is important for remote synchronization applications.
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Basic building units and properties of a fluorescence single plane illumination microscope Rev. Sci. Instrum. 78, 023705 (2007); http://dx.doi.org/10.1063/1.2428277 (7 pages) Online Publication Date: 28 February 2007
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The critical issue of all fluorescence microscopes is the efficient use of the fluorophores, i.e., to detect as many photons from the excited fluorophores as possible, as well as to excite only the fluorophores that are in focus. This issue is addressed in EMBL’s implementation of a light sheet based microscope [single plane illumination microscope (SPIM)], which illuminates only the fluorophores in the focal plane of the detection objective lens. The light sheet is a beam that is collimated in one and focused in the other direction. Since no fluorophores are excited outside the detectors’ focal plane, the method also provides intrinsic optical sectioning. The total number of observable time points can be improved by several orders of magnitude when compared to a confocal fluorescence microscope. The actual improvement factor depends on the number of planes acquired and required to achieve a certain signal to noise ratio. A SPIM consists of five basic units, which address (1) light detection, (2) illumination of the specimen, (3) generation of an appropriate beam of light, (4) translation and rotation of the specimen, and finally (5) control of different mechanical and electronic parts, data collection, and postprocessing of the data. We first describe the basic building units of EMBL’s SPIM and its most relevant properties. We then cover the basic principles underlying this instrument and its unique properties such as the efficient usage of the fluorophores, the reduced photo toxic effects, the true optical sectioning capability, and the excellent axial resolution. We also discuss how an isotropic resolution can be achieved. The optical setup, the control hardware, and the control scheme are explained in detail. We also describe some less obvious refinements of the basic setup that result in an improved performance. The properties of the instrument are demonstrated by images of biological samples that were imaged with one of EMBL’s SPIMs.
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Fast scanning of a pulsed terahertz signal using an oscillating optical delay line Rev. Sci. Instrum. 78, 023101 (2007); http://dx.doi.org/10.1063/1.2437764 (5 pages) Online Publication Date: 5 February 2007
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We describe a fast measurement of a pulsed terahertz signal generated by a femtosecond laser and a photoconductive antenna using an oscillating optical delay line. The method to measure the amplitude of the retroreflector in the oscillating optical delay line is proposed and the displacement of the retroreflector is exactly calculated to acquire the optical delay time in the fast scan mode. With the different oscillation frequency and amplitude of the retroreflector, the pulsed terahertz signals are measured and analyzed. The comparison of the temporal waveform and frequency spectrum between the fast scan mode and the slow scan mode shows a good agreement with the decrease in the scanning time from 60 to 1 s at a signal to noise ratio of 430.
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Calibration of atomic‐force microscope tips Rev. Sci. Instrum. 64, 1868 (1993); http://dx.doi.org/10.1063/1.1143970 (6 pages)
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Images and force measurements taken by an atomic‐force microscope (AFM) depend greatly on the properties of the spring and tip used to probe the sample’s surface. In this article, we describe a simple, nondestructive procedure for measuring the force constant, resonant frequency, and quality factor of an AFM cantilever spring and the effective radius of curvature of an AFM tip. Our procedure uses the AFM itself and does not require additional equipment. |
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Enhanced laser shutter using a hard disk drive rotary voice-coil actuator Rev. Sci. Instrum. 78, 026101 (2007); http://dx.doi.org/10.1063/1.2437199 (2 pages) Online Publication Date: 9 February 2007
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Rotary voice-coil motors from computer hard disk drives make excellent mechanical shutters for light beams. However, the complexity of the necessary electronic driving circuit can hinder their application. A new design is presented here, using a single integrated circuit originally intended for controlling dc motors. A digital input signal switches a unipolar power supply bidirectionally through the voice coil. Short high-current pulses are generated on the transitions to ensure rapid shutter action, while a low holding current reduces the power requirement and heating of the actuator. The circuit can reverse the current to brake the shutter and reduce the impact at the end of its travel. With a focused laser beam, the shutter achieves rise times below 500 ns. A method for producing variable length pulses is also described, demonstrating durations as short as 700 ns.
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Rev. Sci. Instrum. 76, 061101 (2005); http://dx.doi.org/10.1063/1.1927327 (12 pages) Online Publication Date: 26 May 2005
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Nanoelectromechanical systems (NEMS) are drawing interest from both technical and scientific communities. These are electromechanical systems, much like microelectromechanical systems, mostly operated in their resonant modes with dimensions in the deep submicron. In this size regime, they come with extremely high fundamental resonance frequencies, diminished active masses,and tolerable force constants; the quality (Q) factors of resonance are in the range Q ∼ 103–105—significantly higher than those of electrical resonant circuits. These attributes collectively make NEMS suitable for a multitude of technological applications such as ultrafast sensors, actuators, and signal processing components. Experimentally, NEMS are expected to open up investigations of phonon mediated mechanical processes and of the quantum behavior of mesoscopic mechanical systems. However, there still exist fundamental and technological challenges to NEMS optimization. In this review we shall provide a balanced introduction to NEMS by discussing the prospects and challenges in this rapidly developing field and outline an exciting emerging application, nanoelectromechanical mass detection.
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Rev. Sci. Instrum. 78, 026104 (2007); http://dx.doi.org/10.1063/1.2670293 (3 pages) Online Publication Date: 27 February 2007
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Atomically sharp tungsten tips made from single crystal tungsten wire are superior to those made from cold-drawn polycrystalline wire but are rarely used due to their high price. We have devised a method of obtaining highly crystalline tungsten wire by recrystallizing cold-drawn wire. The effect of various heat treatments on the wire microstructure was observed using scanning electron microscopy and x-ray diffraction. A dramatic difference in the shapes of tips etched from cold-drawn and recrystallized wires was observed using transmission electron microscopy. The described annealing process is an inexpensive alternative to using single crystal wires.
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Superconducting quantum interference device instruments and applications Rev. Sci. Instrum. 77, 101101 (2006); http://dx.doi.org/10.1063/1.2354545 (45 pages) Online Publication Date: 11 October 2006
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Superconducting quantum interference devices (SQUIDs) have been a key factor in the development and commercialization of ultrasensitive electric and magnetic measurement systems. In many cases, SQUID instrumentation offers the ability to make measurements where no other methodology is possible. We review the main aspects of designing, fabricating, and operating a number of SQUID measurement systems. While this article is not intended to be an exhaustive review on the principles of SQUID sensors and the underlying concepts behind the Josephson effect, a qualitative description of the operating principles of SQUID sensors and the properties of materials used to fabricate SQUID sensors is presented. The difference between low and high temperature SQUIDs and their suitability for specific applications is discussed. Although SQUID electronics have the capability to operate well above 1 MHz, most applications tend to be at lower frequencies. Specific examples of input circuits and detection coil configuration for different applications and environments, along with expected performance, are described. In particular, anticipated signal strength, magnetic field environment (applied field and external noise), and cryogenic requirements are discussed. Finally, a variety of applications with specific examples in the areas of electromagnetic, material property, nondestructive test and evaluation, and geophysical and biomedical measurements are reviewed.
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Rev. Sci. Instrum. 75, 2787 (2004); http://dx.doi.org/10.1063/1.1785844 (23 pages) Online Publication Date: 2 September 2004
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Since their invention just over 20 years ago, optical traps have emerged as a powerful tool with broad-reaching applications in biology and physics. Capabilities have evolved from simple manipulation to the application of calibrated forces on—and the measurement of nanometer-level displacements of—optically trapped objects. We review progress in the development of optical trapping apparatus, including instrument design considerations, position detection schemes and calibration techniques, with an emphasis on recent advances. We conclude with a brief summary of innovative optical trapping configurations and applications. |
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Mobile spectroscopic system for trace gas detection using a tunable mid-IR laser Rev. Sci. Instrum. 78, 023106 (2007); http://dx.doi.org/10.1063/1.2668940 (6 pages) Online Publication Date: 27 February 2007
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We describe a mobile spectroscopic system for trace gas analysis based on the open path differential absorption spectrometer and the photoacoustic spectrometer. The first method allows long distance measurements (up to a few kilometers) while the second one provides local in situ detection of pollutants. The open path system is based on the nanosecond (f = 10 Hz, τ ≈ 5 ns) lamp pumped Nd:YAG laser and a tunable two cascade optical parametric generator operating in the 5–12 μm spectral region. This source was mounted into the lidar setup based on the coaxial transmitter/receiver. The photoacoustic system was constructed using the same laser as well as a nonresonant photoacoustic cell.
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Time‐of‐Flight Mass Spectrometer with Improved Resolution Rev. Sci. Instrum. 26, 1150 (1955); http://dx.doi.org/10.1063/1.1715212 (8 pages) Online Publication Date: 29 December 2004
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A new type of ion gun is described which greatly improves the resolution of a nonmagnetic time‐of‐flight mass spectrometer. The focusing action of this gun is discussed and analyzed mathematically. The validity of the analysis and the practicability of the gun are demonstrated by the spectra obtained. The spectrometer is capable of measuring the relative abundance of adjacent masses well beyond 100 amu. |
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Cantilever transducers as a platform for chemical and biological sensors Rev. Sci. Instrum. 75, 2229 (2004); http://dx.doi.org/10.1063/1.1763252 (25 pages) Online Publication Date: 21 June 2004
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Since the late 1980s there have been spectacular developments in micromechanical or microelectro-mechanical (MEMS) systems which have enabled the exploration of transduction modes that involve mechanical energy and are based primarily on mechanical phenomena. As a result an innovative family of chemical and biological sensors has emerged. In this article, we discuss sensors with transducers in a form of cantilevers. While MEMS represents a diverse family of designs, devices with simple cantilever configurations are especially attractive as transducers for chemical and biological sensors. The review deals with four important aspects of cantilever transducers: (i) operation principles and models; (ii) microfabrication; (iii) figures of merit; and (iv) applications of cantilever sensors. We also provide a brief analysis of historical predecessors of the modern cantilever sensors. © 2004 American Institute of Physics. |
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Phase modulation atomic force microscope with true atomic resolution Rev. Sci. Instrum. 77, 123703 (2006); http://dx.doi.org/10.1063/1.2405361 (5 pages) Online Publication Date: 21 December 2006
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We have developed a dynamic force microscope (DFM) working in a novel operation mode which is referred to as phase modulation atomic force microscopy (PM-AFM). PM-AFM utilizes a fixed-frequency excitation signal to drive a cantilever, which ensures stable imaging even with occasional tip crash and adhesion to the surface. The tip-sample interaction force is detected as a change of the phase difference between the cantilever deflection and excitation signals and hence the time response is not influenced by the Q factor of the cantilever. These features make PM-AFM more suitable for high-speed imaging than existing DFM techniques such as amplitude modulation and frequency modulation atomic force microscopies. Here we present the basic principle of PM-AFM and the theoretical limit of its performance. The design of the developed PM-AFM is described and its theoretically limited noise performance is demonstrated. Finally, we demonstrate the true atomic resolution imaging capability of the developed PM-AFM by imaging atomic-scale features of mica in water.
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Acousto-optic modulator system for femtosecond laser pulses Rev. Sci. Instrum. 78, 015103 (2007); http://dx.doi.org/10.1063/1.2409868 (4 pages) Online Publication Date: 5 January 2007
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Femtosecond laser pulses have made a revolution in multiphoton excitation microscopy, micromachining, and optical storage for their unprecedented high peak power. However, modulation of their intensity with acousto-optic modulator (AOM) is frustrated by dispersion which results in a significant stretch in pulse width. Here we report a scheme composed of two acousto-optic deflectors (AODs) to modulate the intensity of the femtosecond laser pulses with simultaneous compensation for the temporal dispersion. With commercial AODs, we demonstrated such an AOM system for the femtosecond laser pulses with overall transmission efficiency of around 80%. The pulse width of the exit beam is 115–177 fs for an input pulse of 110 fs, across the wavelength range of 720–920 nm when the temporal dispersion compensation is optimally tuned at 800 nm. The fluorescence intensity in a two-photon microscopy experiment performed using this system increased 5.5-fold over that of the uncompensated AOM.
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Rev. Sci. Instrum. 78, 023701 (2007); http://dx.doi.org/10.1063/1.2437196 (5 pages) Online Publication Date: 5 February 2007
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Liquid 1-decanethiol was confined on an atomic force microscope (AFM) tip apex and the effect was investigated by measuring amplitude-distance curves in dynamic force mode. Within the working distance in the dynamic force mode AFM, the thiol showed strong interactions bridging between a gold-coated probe tip and a gold-coated Si substrate, resulting in unstable amplitude and noisy AFM images. We show that under such a situation, the amplitude change is dominated by the extra forces induced by the active material loaded on the tip apex, overwhelming the amplitude change caused by the geometry of the sample surface, thus resulting in noise in the image the tip collects. We also show that such a contaminant may be removed from the apex by pushing the tip into a material soft enough to avoid damage to the tip.
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High-yield synthesis of conductive carbon nanotube tips for multiprobe scanning tunneling microscope Rev. Sci. Instrum. 78, 013703 (2007); http://dx.doi.org/10.1063/1.2432253 (6 pages) Online Publication Date: 25 January 2007
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We have established a fabrication process for conductive carbon nanotube (CNT) tips for multiprobe scanning tunneling microscope (STM) with high yield. This was achieved, first, by attaching a CNT at the apex of a supporting W tip by a dielectrophoresis method, second, by reinforcing the adhesion between the CNT and the W tip by electron beam deposition of hydrocarbon and subsequent heating, and finally by wholly coating it with a thin metal layer by pulsed laser deposition. More than 90% of the CNT tips survived after long-distance transportation in air, indicating the practical durability of the CNT tips. The shape of the CNT tip did not change even after making contact with another metal tip more than 100 times repeatedly, which evidenced its mechanical robustness. We exploited the CNT tips for the electronic transport measurement by a four-terminal method in a multiprobe STM, in which the PtIr-coated CNT portion of the tip exhibited diffusive transport with a low resistivity of 1.8 kΩ/μm. The contact resistance at the junction between the CNT and the supporting W tip was estimated to be less than 0.7 kΩ. We confirmed that the PtIr thin layer remained at the CNT-W junction portion after excess current passed through, although the PtIr layer was peeled off on the CNT to aggregate into particles, which was likely due to electromigration or a thermally activated diffusion process. These results indicate that the CNT tips fabricated by our recipe possess high reliability and reproducibility sufficient for multiprobe STM measurements.
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High precision electrostatic potential calculations for cylindrically symmetric lenses Rev. Sci. Instrum. 78, 023303 (2007); http://dx.doi.org/10.1063/1.2437757 (11 pages) Online Publication Date: 26 February 2007
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A method is developed for a potential calculation within cylindrically symmetric electrostatic lenses using mesh relaxation techniques, and it is capable of considerably higher accuracies than currently available. The method involves (i) creating very high order algorithms (orders of 6, 8, and 10) for determining the potentials at points in the net using surrounding point values, (ii) eliminating the effect of the large errors caused by singular points, and (iii) reducing gradients in the high gradient regions of the geometry, thereby allowing the algorithms used in these regions to achieve greater precisions—(ii) and (iii) achieved by the use of telescopic multiregions. In addition, an algorithm for points one unit from a metal surface is developed, allowing general mesh point algorithms to be used in these situations, thereby taking advantage of the enhanced precision of the latter. A maximum error function dependent on a sixth order gradient of the potential is defined. With this the single point algorithmic errors are able to be viewed over the entire net. Finally, it is demonstrated that by utilizing the above concepts and procedures, the potential of a point in a reasonably high gradient region of a test geometry can realize a precision of less than 10−10.
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Characterization of a derivative photoacoustic spectrometer Rev. Sci. Instrum. 78, 023104 (2007); http://dx.doi.org/10.1063/1.2472594 (4 pages) Online Publication Date: 16 February 2007
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A design of derivative photoacoustic spectrometer is presented in this article. It mainly includes a wavelength-intensity splitter and a complementary chopper. In our design, a dual wavelength derivative method is introduced to implement a derivative operation. Through the wavelength-intensity splitter, two beams are obtained and then complementarily modulated by the complementary chopper to satisfy the first derivative requirements as well as to achieve the differential of photoacoustic signals. As examples, the first derivative photoacoustic spectra of He–Ne laser and xenon lamp are also presented in this article. The results show that the first derivative photoacoustic spectrum can provide a superior fine spectral structure and spectral resolution compared to the photoacoustic absorption spectrum.
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Spatial charge cloud size of microchannel plates Rev. Sci. Instrum. 78, 023302 (2007); http://dx.doi.org/10.1063/1.2472595 (7 pages) Online Publication Date: 22 February 2007
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We examine the spatial evolution of charge clouds emitted by microchannel plates (MCPs). A model of this evolution is presented, along with a comparison to experimental results. We also present an experimental method to measure the charge cloud radius in which the radial charge cloud distribution is assumed to be Gaussian. When a charge cloud is released from the MCP, its initial size is determined by the number and distribution of excited channels. The size of the charge cloud is examined as a function acceleration voltage, distance between MCP and anode, and MCP bias voltage. Since electrons released from the MCP have various initial energies and angular divergence, the charge cloud size increases as it travels away from the MCP. Space charge effects also contribute to the growth of the charge cloud. The experimental results are in close agreement with our model, which includes these effects. From experiment, we also derive an approximate expression for charge cloud radius as a function of acceleration voltage and distance between MCP and anode. This expression can be used for the practical design and optimization of a position sensing system comprised of multiple anodes.
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