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Top 20 Most Read Articles
February 2009
The 20 articles with the most full-text downloads during the month, in descending order.
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WSXM: A software for scanning probe microscopy and a tool for nanotechnology Rev. Sci. Instrum. 78, 013705 (2007); http://dx.doi.org/10.1063/1.2432410 (8 pages) Online Publication Date: 31 January 2007
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In this work we briefly describe the most relevant features of WSXM, a freeware scanning probe microscopy software based on MS-Windows. The article is structured in three different sections: The introduction is a perspective on the importance of software on scanning probe microscopy. The second section is devoted to describe the general structure of the application; in this section the capabilities of WSXM to read third party files are stressed. Finally, a detailed discussion of some relevant procedures of the software is carried out.
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A vapor cell based on dispensers for laser spectroscopy Rev. Sci. Instrum. 80, 013101 (2009); http://dx.doi.org/10.1063/1.3036980 (3 pages) Online Publication Date: 6 January 2009
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We describe a simple strontium vapor cell for laser spectroscopy experiments. Strontium vapor is produced using an electrically heated commercial dispenser source. The sealed cell operates at room temperature, and without a buffer gas or vacuum pump. The cell was characterized using laser spectroscopy, and was found to offer stable and robust operation, with an estimated lifetime of >10 000 h. By changing the dispenser, this technique can be readily extended to other alkali and alkaline earth elements.
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Rev. Sci. Instrum. 80, 023701 (2009); http://dx.doi.org/10.1063/1.3073964 (6 pages) Online Publication Date: 2 February 2009
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Frequency modulation atomic force microscopy (FM-AFM) is rapidly evolving as the technique of choice in the pursuit of high resolution imaging of biological samples in ambient environments. The enhanced stability afforded by this dynamic AFM mode combined with quantitative analysis enables the study of complex biological systems, at the nanoscale, in their native physiological environment. The operational bandwidth and accuracy of constant amplitude FM-AFM in low Q environments is heavily dependent on the cantilever dynamics and the performance of the demodulation and feedback loops employed to oscillate the cantilever at its resonant frequency with a constant amplitude. Often researchers use ad hoc feedback gains or instrument default values that can result in an inability to quantify experimental data. Poor choice of gains or exceeding the operational bandwidth can result in imaging artifacts and damage to the tip and/or sample. To alleviate this situation we present here a methodology to determine feedback gains for the amplitude and frequency loops that are specific to the cantilever and its environment, which can serve as a reasonable “first guess,” thus making quantitative FM-AFM in low Q environments more accessible to the nonexpert. This technique is successfully demonstrated for the low Q systems of air (Q ∼ 40) and water (Q ∼ 1). In addition, we present FM-AFM images of MC3T3-E1 preosteoblast cells acquired using the gains calculated by this methodology demonstrating the effectiveness of this technique.
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Femtosecond pulse shaping using spatial light modulators Rev. Sci. Instrum. 71, 1929 (2000); http://dx.doi.org/10.1063/1.1150614 (32 pages)
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We review the field of femtosecond pulse shaping, in which Fourier synthesis methods are used to generate nearly arbitrarily shaped ultrafast optical wave forms according to user specification. An emphasis is placed on programmable pulse shaping methods based on the use of spatial light modulators. After outlining the fundamental principles of pulse shaping, we then present a detailed discussion of pulse shaping using several different types of spatial light modulators. Finally, new research directions in pulse shaping, and applications of pulse shaping to optical communications, biomedical optical imaging, high power laser amplifiers, quantum control, and laser-electron beam interactions are reviewed. © 2000 American Institute of Physics. |
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Automatic beam alignment system for a pulsed infrared laser Rev. Sci. Instrum. 80, 013102 (2009); http://dx.doi.org/10.1063/1.3058604 (5 pages) Online Publication Date: 7 January 2009
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A fully automatic alignment system for a pulsed infrared laser beam (5 ns pulses, 10 Hz repetition rate, 1.3 μm wavelength) was developed and tested. It compensates for long-term fluctuations of the beam initial position and direction—the automatic realignment is performed every 10 min, and lasts typically 1–2 min. The system adjusts the beam initial position with a maximum error of 0.5 mm (10% of the beam diameter) and the beam direction with a maximum error of 50 μrad. The solution is based on two InGaAs quadrant photodiodes as the position detectors and two motorized mirrors controlled by a personal computer. The signals from the quadrant detectors are processed by a peak detector and digitized by an analog to digital converter, which is synchronized with the laser pulses.
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Rev. Sci. Instrum. 80, 013706 (2009); http://dx.doi.org/10.1063/1.3062945 (8 pages) Online Publication Date: 30 January 2009
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A high-speed imaging system developed for two-dimensional counting of charged particles is presented. Microchannel plates coupled with a phosphor screen of a short emission lifetime (<1 μs) are used to visualize the two-dimensional positions of charged-particle impacts, and the image on the phosphor screen is captured with a 1 kHz complementary metal oxide semiconductor (CMOS) image sensor (512×512 pixels). A multistage image intensifier consisting of the first and second generation devices was used to compensate for the low sensitivity of CMOS. The centers of gravity (COG) of individual light spots in each image frame are calculated in real time by a field programmable gate array circuit. The performance of this system is tested by time-resolved photoelectron imaging (TR-PEI) of NO using (1+1′) resonance enhanced multiphoton ionization via the A 2Σ+ state with a femtosecond laser operated at 1 kHz. The new system enabled COG detection for more than ten particles in each frame at 1 kHz and achieved an extremely high degree of accuracy in the measurement of photoelectron angular distributions in TR-PEI.
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Low-temperature and high magnetic field dynamic scanning capacitance microscope Rev. Sci. Instrum. 80, 013704 (2009); http://dx.doi.org/10.1063/1.3069289 (8 pages) Online Publication Date: 22 January 2009
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We demonstrate a dynamic scanning capacitance microscope (DSCM) that operates at large bandwidths, cryogenic temperatures, and high magnetic fields. The setup is based on a noncontact atomic force microscope (AFM) with a quartz tuning fork sensor for the nonoptical excitation and readout in topography, force, and dissipation measurements. The metallic AFM tip forms part of a rf resonator with a transmission characteristics modulated by the sample properties and the tip-sample capacitance. The tip motion gives rise to a modulation of the capacitance at the frequency of the AFM sensor and its harmonics, which can be recorded simultaneously with the AFM data. We use an intuitive model to describe and analyze the resonator transmission and show that for most experimental conditions it is proportional to the complex tip-sample conductance, which depends on both the tip-sample capacitance and the sample resistivity. We demonstrate the performance of the DSCM on metal disks buried under a polymer layer and we discuss images recorded on a two-dimensional electron gas in the quantum Hall effect regime, i.e. at cryogenic temperatures and in high magnetic fields, where we directly image the formation of compressible stripes at the physical edge of the sample.
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Photoacoustic imaging in biomedicine Rev. Sci. Instrum. 77, 041101 (2006); http://dx.doi.org/10.1063/1.2195024 (22 pages) Online Publication Date: 17 April 2006
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Photoacoustic imaging (also called optoacoustic or thermoacoustic imaging) has the potential to image animal or human organs, such as the breast and the brain, with simultaneous high contrast and high spatial resolution. This article provides an overview of the rapidly expanding field of photoacoustic imaging for biomedical applications. Imaging techniques, including depth profiling in layered media, scanning tomography with focused ultrasonic transducers, image forming with an acoustic lens, and computed tomography with unfocused transducers, are introduced. Special emphasis is placed on computed tomography, including reconstruction algorithms, spatial resolution, and related recent experiments. Promising biomedical applications are discussed throughout the text, including (1) tomographic imaging of the skin and other superficial organs by laser-induced photoacoustic microscopy, which offers the critical advantages, over current high-resolution optical imaging modalities, of deeper imaging depth and higher absorption contrasts, (2) breast cancer detection by near-infrared light or radio-frequency–wave-induced photoacoustic imaging, which has important potential for early detection, and (3) small animal imaging by laser-induced photoacoustic imaging, which measures unique optical absorption contrasts related to important biochemical information and provides better resolution in deep tissues than optical imaging.
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Rev. Sci. Instrum. 76, 061101 (2005); http://dx.doi.org/10.1063/1.1927327 (12 pages) Online Publication Date: 26 May 2005
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Nanoelectromechanical systems (NEMS) are drawing interest from both technical and scientific communities. These are electromechanical systems, much like microelectromechanical systems, mostly operated in their resonant modes with dimensions in the deep submicron. In this size regime, they come with extremely high fundamental resonance frequencies, diminished active masses,and tolerable force constants; the quality (Q) factors of resonance are in the range Q ∼ 103–105—significantly higher than those of electrical resonant circuits. These attributes collectively make NEMS suitable for a multitude of technological applications such as ultrafast sensors, actuators, and signal processing components. Experimentally, NEMS are expected to open up investigations of phonon mediated mechanical processes and of the quantum behavior of mesoscopic mechanical systems. However, there still exist fundamental and technological challenges to NEMS optimization. In this review we shall provide a balanced introduction to NEMS by discussing the prospects and challenges in this rapidly developing field and outline an exciting emerging application, nanoelectromechanical mass detection.
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Calibration of rectangular atomic force microscope cantilevers Rev. Sci. Instrum. 70, 3967 (1999); http://dx.doi.org/10.1063/1.1150021 (3 pages)
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A method to determine the spring constant of a rectangular atomic force microscope cantilever is proposed that relies solely on the measurement of the resonant frequency and quality factor of the cantilever in fluid (typically air), and knowledge of its plan view dimensions. This method gives very good accuracy and improves upon the previous formulation by Sader et al. [Rev. Sci. Instrum. 66, 3789 (1995)] which, unlike the present method, requires knowledge of both the cantilever density and thickness. © 1999 American Institute of Physics. |
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Rev. Sci. Instrum. 75, 2787 (2004); http://dx.doi.org/10.1063/1.1785844 (23 pages) Online Publication Date: 2 September 2004
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Since their invention just over 20 years ago, optical traps have emerged as a powerful tool with broad-reaching applications in biology and physics. Capabilities have evolved from simple manipulation to the application of calibrated forces on—and the measurement of nanometer-level displacements of—optically trapped objects. We review progress in the development of optical trapping apparatus, including instrument design considerations, position detection schemes and calibration techniques, with an emphasis on recent advances. We conclude with a brief summary of innovative optical trapping configurations and applications. |
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Chopper system for time resolved experiments with synchrotron radiation Rev. Sci. Instrum. 80, 015101 (2009); http://dx.doi.org/10.1063/1.3036983 (10 pages) Online Publication Date: 6 January 2009
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A chopper system for time resolved pump-probe experiments with x-ray beams from a synchrotron is described. The system has three parts: a water-cooled heatload chopper, a high-speed chopper, and a millisecond shutter. The chopper system, which is installed in beamline ID09B at the European Synchrotron Radiation Facility, provides short x-ray pulses for pump-probe experiments with ultrafast lasers. The chopper system can produce x-ray pulses as short as 200 ns in a continuous beam and repeat at frequencies from 0 to 3 kHz. For bunch filling patterns of the synchrotron with pulse separations greater than 100 ns, the high-speed chopper can isolate single 100 ps x-ray pulses that are used for the highest time resolution. A new rotor in the high-speed chopper is presented with a single pulse (100 ps) and long pulse (10 μs) option. In white beam experiments, the heatload of the (noncooled) high-speed chopper is lowered by a heatload chopper, which absorbs 95% of the incoming power without affecting the pulses selected by the high speed chopper.
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Calibration of atomic‐force microscope tips Rev. Sci. Instrum. 64, 1868 (1993); http://dx.doi.org/10.1063/1.1143970 (6 pages)
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Images and force measurements taken by an atomic‐force microscope (AFM) depend greatly on the properties of the spring and tip used to probe the sample’s surface. In this article, we describe a simple, nondestructive procedure for measuring the force constant, resonant frequency, and quality factor of an AFM cantilever spring and the effective radius of curvature of an AFM tip. Our procedure uses the AFM itself and does not require additional equipment. |
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Cantilever transducers as a platform for chemical and biological sensors Rev. Sci. Instrum. 75, 2229 (2004); http://dx.doi.org/10.1063/1.1763252 (25 pages) Online Publication Date: 21 June 2004
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Since the late 1980s there have been spectacular developments in micromechanical or microelectro-mechanical (MEMS) systems which have enabled the exploration of transduction modes that involve mechanical energy and are based primarily on mechanical phenomena. As a result an innovative family of chemical and biological sensors has emerged. In this article, we discuss sensors with transducers in a form of cantilevers. While MEMS represents a diverse family of designs, devices with simple cantilever configurations are especially attractive as transducers for chemical and biological sensors. The review deals with four important aspects of cantilever transducers: (i) operation principles and models; (ii) microfabrication; (iii) figures of merit; and (iv) applications of cantilever sensors. We also provide a brief analysis of historical predecessors of the modern cantilever sensors. © 2004 American Institute of Physics. |
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Measurement of femtosecond electron pulse length and the temporal broadening due to space charge Rev. Sci. Instrum. 80, 013902 (2009); http://dx.doi.org/10.1063/1.3062863 (4 pages) Online Publication Date: 15 January 2009
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The temporal width of ultrashort electron pulses as a function of beam intensity was measured on the femtosecond time scale with a customized streak camera. The results show that the temporal profile of an electron pulse is Gaussian at low beam intensity and progressively evolves to a top-hat shape due to space charge broadening as the beam intensity increases. The strong correlation between the pulse width and beam intensity observed in our streaking measurements agrees very well with the mean-field calculation and supports the main conclusion of previous theoretical studies that the space charge broadening plays a determinant role.
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Cryogenic ion trapping systems with surface-electrode traps Rev. Sci. Instrum. 80, 013103 (2009); http://dx.doi.org/10.1063/1.3058605 (9 pages) Online Publication Date: 7 January 2009
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We present two simple cryogenic rf ion trap systems in which cryogenic temperatures and ultra high vacuum pressures can be reached in as little as 12 h. The ion traps are operated either in a liquid helium bath cryostat or in a low vibration closed cycle cryostat. The fast turn around time and availability of buffer gas cooling made the systems ideal for testing surface-electrode ion traps. The vibration amplitude of the closed cycled cryostat was found to be below 106 nm. We evaluated the systems by loading surface-electrode ion traps with 88Sr+ ions using laser ablation, which is compatible with the cryogenic environment. Using Doppler cooling we observed small ion crystals in which optically resolved ions have a trapped lifetime over 2500 min.
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Time‐of‐Flight Mass Spectrometer with Improved Resolution Rev. Sci. Instrum. 26, 1150 (1955); http://dx.doi.org/10.1063/1.1715212 (8 pages) Online Publication Date: 29 December 2004
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A new type of ion gun is described which greatly improves the resolution of a nonmagnetic time‐of‐flight mass spectrometer. The focusing action of this gun is discussed and analyzed mathematically. The validity of the analysis and the practicability of the gun are demonstrated by the spectra obtained. The spectrometer is capable of measuring the relative abundance of adjacent masses well beyond 100 amu. |
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Rev. Sci. Instrum. 80, 013705 (2009); http://dx.doi.org/10.1063/1.3072663 (8 pages) Online Publication Date: 26 January 2009
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We describe the design and construction of a laser scanning confocal microscope with programmable beam forming optics. The amplitude, phase, and polarization of the laser beam used in the microscope can be controlled in real time with the help of a liquid crystal spatial light modulator, acting as a computer generated hologram, in conjunction with a polarizing beam splitter and two right angled prisms assembly. Two scan mirrors, comprising an on-axis fast moving scan mirror for line scanning and an off-axis slow moving scan mirror for frame scanning, configured in a way to minimize the movement of the scanned beam over the pupil plane of the microscope objective, form the XY scan unit. The confocal system, that incorporates the programmable beam forming unit and the scan unit, has been implemented to image in both reflected and fluorescence light from the specimen. Efficiency of the system to programmably generate custom defined vector beams has been demonstrated by generating a bottle structured focal volume, which in fact is the overlap of two cross polarized beams, that can simultaneously improve both the lateral and axial resolutions if used as the de-excitation beam in a stimulated emission depletion confocal microscope.
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Thermally actuated tapping mode atomic force microscopy with polymer microcantilevers Rev. Sci. Instrum. 80, 023703 (2009); http://dx.doi.org/10.1063/1.3078010 (4 pages) Online Publication Date: 5 February 2009
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This paper demonstrates a thermally actuated tapping mode atomic force microscopy (AFM) with a polymer cantilever. The cantilever (350×250×3 μm3) is made from polyimide and includes an embedded resistive heater for thermal actuation. The oscillation of the cantilever is due to the stress gradient caused by alternating heating and cooling from the periodic ac excitation of the heater. The tip oscillation amplitude is 5–10 nm in air. The oscillation occurs at 2ω and is a linear function of the applied voltage. The maximum oscillation amplitude is seen at 0.8 Hz with a 3dB frequency of 26 Hz. The damping of the oscillation due to tip-sample interaction is used to image the sample without any optomechanical feedback. Scans with a 200 nm tall grating indicate a resolution comparable to deflection signal from the AFM in contact mode.
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Rev. Sci. Instrum. 80, 016101 (2009); http://dx.doi.org/10.1063/1.3053122 (3 pages) Online Publication Date: 7 January 2009
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We describe a simple-to-construct programmable direct-digital-synthesis-based controller for use with acousto-optic deflectors. Our controller corrects for nonlinear diffraction efficiency versus diffraction angle, provides superior stability, functionality, and configurability, and costs a fraction of commercially available systems. Using this instrument, we move a 1 μm diameter bead by 1-nm-sized steps and resolve these steps.
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